Let me see if I understood that...You bought two great looking corals at the LFS and now that you have had them at home for 48 hours and done a water change they arent looking so good...right?
There could be a number of reasons for this. The difference in water quality in your tank VS what the LFS had in theres. A little difference in PH or Alk or a dozen other things like that can have a profound effect often times on new additions. Temperature difference could also be a factor. Although after about 48 hours one would think they would be over any differences in something this small. Difference in lighting from the LFS to your tank could also be a factor as well. This is not to imply that you have inadequate lighting but for SPS corals the difference in being under 20K halides at the LFS and then coming to your home with 10k halides can have a profound effect. For example when I change out 14K bulbs in my SPS tank things are kinda crazy for a few days while the new bulb which is more intense to begin with compared to the spent one thats about out of gas and has shifted in color. It doesnt seem like much to us but for a coral this is a huge change. I am sure there are a thousand other reasons for sure that would cause your corals to pout for a few days while they slowly adjust and adapt to the conditions in your tank.
Since many of us have Nano Reefs water changes can dramatically change the water chemistry in the tank more so than one might realize. For example I easily loose a gallon a day just to evaporation in my 20 gallon SPS tank. Instead of pouring the make up water in I will drip it into the tank over a couple of hours to lessen the impact of additional water being added to top things off. I do the same thing when adding make up water using a small hose to siphon water from a bucket into the tank. This prevents sudden and sometimes drastic changes from occuring in my tank making the changes in water chemistry more gradual.
Not sure what the problem is but these may be some of the cuases potentially. Hopefully they bounce back soon, none the less for wear and tear.